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Publikationstyp: Zeitschriftenaufsatz
Dokumenttyp: Data Article

Jahr: 2018

AutorInnen: Kumar, G; Hummel, K; Razzazi-Fazeli, E; El-Matbouli, M

Titel: Proteome Profiles of Head Kidney and Spleen of Rainbow Trout (Oncorhynchus Mykiss).

Quelle: Proteomics. 2018; 18(17):e1800101


Entstanden unter Nutzung der Ressourcen von
VetCore (Proteomics);

Autor/innen der Vetmeduni Vienna:

El-Matbouli Mansour
Hummel Karin
Kumar Gokhlesh
Razzazi-Fazeli Ebrahim

Beteiligte Vetmed-Organisationseinheiten
Universitätsklinik für Geflügel und Fische, Klinische Abteilung für Fischmedizin
VetCore


Zugehörige(s) Projekt(e): Proteomik der Regenbogenforelle als Antwort auf Y. ruckeri


Abstract:
The head kidney and spleen are major lymphoid organs of the teleost fish. The authors identify proteome profiles of head kidney and spleen of rainbow trout (Oncorhynchus mykiss) using a shotgun proteomic approach. Gene ontology annotation of proteins is predicted using bioinformatic tools. This study represents detailed proteome profiles of head kidney and spleen of rainbow trout, with a total of 3241 and 2542 proteins identified, respectively. It is found that lymphoid organs are equipped with a variety of functional proteins related to defense, receptor, signal transduction, antioxidant, cytoskeleton, transport, binding, and metabolic processes. The identified proteome profiles will serve as a template for understanding lymphoid organ functions in salmonids and will increase the amount of spectra information of rainbow trout proteins in the public data repository PRIDE. This data can be accessed via ProteomeXchange with identifiers PXD008473 and PXD008478.© 2018 The Authors. Proteomics Published by WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords Pubmed: Animals
Fish Proteinsmetabolism
Head Kidneymetabolism
Oncorhynchus mykissmetabolism
Proteomeanalysismetabolism
Spleenmetabolism
Tandem Mass Spectrometry

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